STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08315.1KEGG: mmg:MTBMA_c00680 hypothetical protein; PFAM: Pyrrolo-quinoline quinone repeat; SMART: Pyrrolo-quinoline quinone beta-propeller repeat. (411 aa)    
Predicted Functional Partners:
ADZ08497.1
Band 7 protein; KEGG: mth:MTH1780 stomatin-like protein; PFAM: Band 7 protein; SMART: Band 7 protein.
  
 
 0.702
ADZ09865.1
Band 7 protein; KEGG: mth:MTH1780 stomatin-like protein; PFAM: Band 7 protein; SMART: Band 7 protein.
  
 
 0.702
ADZ08313.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: mth:MTH1487 ABC transporter (ATP-binding protein); PFAM: ABC transporter-like.
 
     0.695
ADZ08312.1
Transcriptional regulator, PadR-like family; PFAM: Transcription regulator PadR N-terminal-like; KEGG: mmg:MTBMA_c00710 transcriptional regulator.
 
     0.688
ADZ08314.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c00690 ABC transporter, permease component.
 
     0.688
ADZ08398.1
Peptidase M50; KEGG: mmg:MTBMA_c17550 protease; PFAM: Peptidase M50; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF.
 
  
 0.637
ADZ09422.1
KEGG: mvn:Mevan_0177 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase.
       0.615
ADZ08746.1
PFAM: Peptidase M50; KEGG: pab:PAB1063 hypothetical protein.
  
  
 0.560
hisS
ATP phosphoribosyltransferase regulatory subunit; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: ATP phosphoribosyltransferase regulatory subunit; Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: mth:MTH244 histidyl-tRNA synthetase.
  
    0.554
rpl13
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
  
 0.546
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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