Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADZ08334.1 | ADZ08336.1 | Metbo_0081 | Metbo_0083 | KEGG: mfv:Mfer_0843 hypothetical protein. | Manually curated; PFAM: Radical SAM; Helix-hairpin-helix motif; KEGG: mru:mru_2152 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB. | 0.506 |
| ADZ08334.1 | cbiA | Metbo_0081 | Metbo_0082 | KEGG: mfv:Mfer_0843 hypothetical protein. | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source. | 0.742 |
| ADZ08336.1 | ADZ08334.1 | Metbo_0083 | Metbo_0081 | Manually curated; PFAM: Radical SAM; Helix-hairpin-helix motif; KEGG: mru:mru_2152 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB. | KEGG: mfv:Mfer_0843 hypothetical protein. | 0.506 |
| ADZ08336.1 | cbiA | Metbo_0083 | Metbo_0082 | Manually curated; PFAM: Radical SAM; Helix-hairpin-helix motif; KEGG: mru:mru_2152 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB. | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source. | 0.562 |
| ADZ08336.1 | guaB | Metbo_0083 | Metbo_0983 | Manually curated; PFAM: Radical SAM; Helix-hairpin-helix motif; KEGG: mru:mru_2152 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.439 |
| cbiA | ADZ08334.1 | Metbo_0082 | Metbo_0081 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source. | KEGG: mfv:Mfer_0843 hypothetical protein. | 0.742 |
| cbiA | ADZ08336.1 | Metbo_0082 | Metbo_0083 | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source. | Manually curated; PFAM: Radical SAM; Helix-hairpin-helix motif; KEGG: mru:mru_2152 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB. | 0.562 |
| guaB | ADZ08336.1 | Metbo_0983 | Metbo_0083 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Manually curated; PFAM: Radical SAM; Helix-hairpin-helix motif; KEGG: mru:mru_2152 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB. | 0.439 |