Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ08385.1PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: mpl:Mpal_2574 extradiol ring-cleavage dioxygenase class III protein subunit B. (262 aa)    
Predicted Functional Partners:
ADZ08386.1
PFAM: Iron sulphur-containing domain, CDGSH-type; Ferredoxin soy-like; KEGG: mac:MA0986 hypothetical protein.
       0.739
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
      0.669
ADZ09686.1
Pirin domain protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: ank:AnaeK_1669 pirin domain protein; Belongs to the pirin family.
 
  
 0.624
ADZ08269.1
Ureidoglycolate lyase; KEGG: mfv:Mfer_0698 5-carboxymethyl-2-hydroxymuconatedelta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like.
  
  
 0.445
ADZ08667.1
Lactaldehyde dehydrogenase; KEGG: msi:Msm_0467 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
 
  
 0.441
ADZ09761.1
Transcriptional regulator, HxlR family; PFAM: Helix-turn-helix, HxlR type; KEGG: mac:MA0414 hypothetical protein.
 
  
 0.420
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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