Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ08386.1PFAM: Iron sulphur-containing domain, CDGSH-type; Ferredoxin soy-like; KEGG: mac:MA0986 hypothetical protein. (241 aa)    
Predicted Functional Partners:
ADZ08385.1
PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: mpl:Mpal_2574 extradiol ring-cleavage dioxygenase class III protein subunit B.
       0.739
ADZ08478.1
PFAM: Protein of unknown function DUF1622; KEGG: mpi:Mpet_2051 hypothetical protein.
  
     0.521
ADZ10356.1
Transcriptional regulator, ArsR family; KEGG: mpd:MCP_0329 putative transcriptional regulator; PFAM: 4-vinyl reductase, 4VR; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
     0.454
ADZ09240.1
Transcriptional regulator, ArsR family; KEGG: mpd:MCP_0329 putative transcriptional regulator; PFAM: 4-vinyl reductase, 4VR; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
     0.438
ADZ08389.1
Transcriptional regulator, ArsR family; KEGG: mpd:MCP_0329 putative transcriptional regulator; PFAM: 4-vinyl reductase, 4VR; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
     0.414
ADZ09267.1
Transcriptional regulator, ArsR family; KEGG: mmg:MTBMA_c17390 transcriptional regulator; PFAM: 4-vinyl reductase, 4VR; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
     0.407
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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