STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08417.1PFAM: Auxin efflux carrier; KEGG: mth:MTH1382 hypothetical protein. (300 aa)    
Predicted Functional Partners:
ADZ09228.1
PFAM: Peptidase M48; KEGG: mmg:MTBMA_c03880 peptidase related protein.
 
  
 0.706
htpX-2
Protease htpX; KEGG: dth:DICTH_0757 heat shock protein HtpX; HAMAP: Peptidase M48, protease HtpX, putative; PFAM: Peptidase M48; Belongs to the peptidase M48B family.
 
  
 0.702
htpX
Protease htpX; KEGG: mmg:MTBMA_c09550 heat shock protein; HAMAP: Peptidase M48, protease HtpX, putative; PFAM: Peptidase M48; Belongs to the peptidase M48B family.
  
  
 0.659
ADZ08925.1
KEGG: cac:CA_C3076 phosphate butyryltransferase; PFAM: Phosphate acetyl/butaryl transferase.
  
  
 0.659
radA
DNA repair and recombination protein radA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
       0.590
ADZ08419.1
Replication factor-A domain protein; PFAM: Replication factor A, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mmg:MTBMA_c17710 replication factor A.
 
     0.517
ADZ09944.1
PFAM: Cation/H+ exchanger; KEGG: gfo:GFO_0816 sodium/hydrogen exchanger family protein.
     
 0.438
ADZ08614.1
Anion transporter; KEGG: mth:MTH788 sodium/dicarboxylate or sulfate cotransporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter.
  
   0.408
ADZ08703.1
KEGG: mmg:MTBMA_c11840 transporter protein; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter.
  
   0.408
ADZ09331.1
Anion transporter; KEGG: mth:MTH788 sodium/dicarboxylate or sulfate cotransporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter.
  
   0.408
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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