STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08438.1MgtE intracellular region; KEGG: mst:Msp_1555 hypothetical protein; PFAM: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core. (413 aa)    
Predicted Functional Partners:
ADZ08439.1
PFAM: Natural resistance-associated macrophage protein; KEGG: mst:Msp_1554 Mn2+/Fe2+ transporter.
 
  
 0.944
ADZ09422.1
KEGG: mvn:Mevan_0177 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase.
       0.790
ADZ08437.1
Transcriptional regulator, AsnC family; KEGG: mst:Msp_1556 transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type.
       0.680
ADZ08436.1
KEGG: mth:MTH1400 hypothetical protein.
       0.411
ADZ08435.1
KEGG: mth:MTH1399 hypothetical protein.
       0.401
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.