rpl21e protein (Methanobacterium lacus) - STRING interaction network

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Your Current Organism:

Methanobacterium lacus

NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADZ09043.1	rpl13	Metbo_0792	Metbo_0810	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
ADZ09043.1	rpl18e	Metbo_0792	Metbo_0809	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	HAMAP: Ribosomal protein L18e, archaea; KEGG: msi:Msm_1429 50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.	0.996
ADZ09043.1	rpl19e	Metbo_0792	Metbo_0793	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
ADZ09043.1	rpl21e	Metbo_0792	Metbo_0194	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	KEGG: mmg:MTBMA_c17090 50S ribosomal protein L21e; HAMAP: Ribosomal protein L21e, archaeal; PFAM: Ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.998
ADZ09043.1	rpl24e	Metbo_0792	Metbo_0609	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	50S ribosomal protein L24e; Binds to the 23S rRNA.	0.998
ADZ09043.1	rpl3	Metbo_0792	Metbo_0774	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.999
ADZ09043.1	rpl30	Metbo_0792	Metbo_0796	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	KEGG: mmg:MTBMA_c05130 50S ribosomal protein L30P; TIGRFAM: Ribosomal protein L30, archaeal; PFAM: Ribosomal protein L30, ferredoxin-like fold domain.	0.999
ADZ09043.1	rpl31e	Metbo_0792	Metbo_0544	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	KEGG: mfv:Mfer_0167 lsu ribosomal protein l31e; HAMAP: Ribosomal protein L31e; PFAM: Ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.998
ADZ09043.1	rpl7ae	Metbo_0792	Metbo_0611	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.998
ADZ09043.1	rps9	Metbo_0792	Metbo_0811	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	KEGG: mth:MTH39 ribosomal protein S16; TIGRFAM: Ribosomal protein S9, archaeal; PFAM: Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rpl13	ADZ09043.1	Metbo_0810	Metbo_0792	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: Ribosomal protein L32e; KEGG: mru:mru_0869 ribosomal protein L32e Rpl32e.	0.999
rpl13	rpl18e	Metbo_0810	Metbo_0809	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	HAMAP: Ribosomal protein L18e, archaea; KEGG: msi:Msm_1429 50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.	0.999
rpl13	rpl19e	Metbo_0810	Metbo_0793	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
rpl13	rpl21e	Metbo_0810	Metbo_0194	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	KEGG: mmg:MTBMA_c17090 50S ribosomal protein L21e; HAMAP: Ribosomal protein L21e, archaeal; PFAM: Ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.999
rpl13	rpl24e	Metbo_0810	Metbo_0609	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L24e; Binds to the 23S rRNA.	0.999
rpl13	rpl3	Metbo_0810	Metbo_0774	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.999
rpl13	rpl30	Metbo_0810	Metbo_0796	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	KEGG: mmg:MTBMA_c05130 50S ribosomal protein L30P; TIGRFAM: Ribosomal protein L30, archaeal; PFAM: Ribosomal protein L30, ferredoxin-like fold domain.	0.999
rpl13	rpl31e	Metbo_0810	Metbo_0544	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	KEGG: mfv:Mfer_0167 lsu ribosomal protein l31e; HAMAP: Ribosomal protein L31e; PFAM: Ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.999
rpl13	rpl7ae	Metbo_0810	Metbo_0611	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.999
rpl13	rps9	Metbo_0810	Metbo_0811	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	KEGG: mth:MTH39 ribosomal protein S16; TIGRFAM: Ribosomal protein S9, archaeal; PFAM: Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999

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