Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ08468.1TIGRFAM: Conserved hypothetical protein CHP00061; KEGG: mmg:MTBMA_c16880 hypothetical protein. (239 aa)    
Predicted Functional Partners:
ADZ09613.1
PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mth:MTH1097 hypothetical protein.
 
    0.881
ADZ10499.1
PFAM: NADPH-dependent FMN reductase; KEGG: mem:Memar_0225 NADPH-dependent FMN reductase.
  
    0.810
ADZ08469.1
KEGG: mth:MTH1301 hypothetical protein.
       0.791
psmA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
 
 
 0.738
tgtA
7-cyano-7-deazaguanine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
 
     0.708
dnaG
UPF0095 protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome.
 
     0.637
ADZ08781.1
KEGG: mfv:Mfer_0045 mcm family protein; PFAM: DNA-dependent ATPase MCM; SMART: DNA-dependent ATPase MCM; Hedgehog/intein hint, N-terminal; Hedgehog/intein hint domain, C-terminal; Belongs to the MCM family.
 
     0.627
ADZ09931.1
PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: geo:Geob_0985 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
    0.593
ADZ10036.1
PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mba:Mbar_A1549 antibiotic resistance protein.
  
    0.593
nac
Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.
  
     0.590
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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