STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08487.1PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: cac:CA_C3374 acetyltransferase. (149 aa)    
Predicted Functional Partners:
ADZ08488.1
KEGG: mmg:MTBMA_c15860 DNA polymerase; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B.
   
 
 0.663
ADZ08489.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: msi:Msm_1104 acetyltransferase.
 
   
 0.572
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.497
ADZ09918.1
KEGG: cbb:CLD_3584 hypothetical protein.
  
     0.452
ADZ08490.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: rci:LRC338 hypothetical protein.
  
  
 0.431
ADZ08588.1
Glutamine--scyllo-inositol transaminase; KEGG: mmg:MTBMA_c15650 pyridoxal phosphate-dependent enzyme; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.420
ADZ10304.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: mst:Msp_1114 dTDP-D-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
  
  
 0.420
ADZ09104.1
PFAM: Glycosyl transferase, family 2; KEGG: has:Halsa_0644 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.417
ADZ10084.1
PFAM: 4Fe-4S binding domain; KEGG: mth:MTH221 hypothetical protein.
 
   
 0.411
ADZ09498.1
PFAM: Protein of unknown function DUF1700; KEGG: btl:BALH_3109 hypothetical protein.
 
     0.406
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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