STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08514.1KEGG: mmg:MTBMA_c16360 energy-converting hydrogenase B, subunit D. (77 aa)    
Predicted Functional Partners:
ADZ08511.1
PFAM: cation antiporter; KEGG: mmg:MTBMA_c16390 energy-converting hydrogenase B, subunit A.
 
 
 0.996
ADZ08513.1
KEGG: mmg:MTBMA_c16370 energy-converting hydrogenase B, subunit C.
  
 
 0.993
ADZ08515.1
PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; KEGG: mth:MTH1247 putative monovalent cation/H+ antiporter subunit C.
 
 
 0.993
ADZ08517.1
NADH dehydrogenase (quinone); KEGG: mth:MTH1246 hydrogenase subunit F; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase.
 
 
 0.988
ADZ08520.1
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: mmg:MTBMA_c16310 energy-converting hydrogenase B, subunit I.
 
 
 
 0.982
ADZ08512.1
PFAM: Multiple resistance and pH regulation protein F; KEGG: mth:MTH1250 putative monovalent cation/H+ antiporter subunit F.
   
 
 0.980
ADZ08523.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S binding domain; KEGG: mmg:MTBMA_c16280 energy-converting hydrogenase B, subunit L.
 
 
 
 0.970
ADZ08526.1
KEGG: mth:MTH1237 NADH dehydrogenase (ubiquinone), subunit 1 related protein.
 
 
   0.961
ADZ08519.1
KEGG: mmg:MTBMA_c16320 energy-converting hydrogenase B, subunit H.
   
 
 0.938
ADZ08525.1
NADH dehydrogenase (quinone); KEGG: mmg:MTBMA_c16260 energy-converting hydrogenase B, subunit N; PFAM: Nickel-dependent hydrogenase, large subunit; NADH-quinone oxidoreductase, subunit D.
 
 
 
 0.911
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.