STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08523.14Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S binding domain; KEGG: mmg:MTBMA_c16280 energy-converting hydrogenase B, subunit L. (162 aa)    
Predicted Functional Partners:
ADZ10731.1
NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S binding domain; KEGG: mth:MTH1549 NADP-reducing hydrogenase, subunit C; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
  
 0.999
ADZ10732.1
PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: mth:MTH1548 NADH dehydrogenase subunit E.
  
 0.999
ADZ08526.1
KEGG: mth:MTH1237 NADH dehydrogenase (ubiquinone), subunit 1 related protein.
 
 
 0.998
ADZ08520.1
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: mmg:MTBMA_c16310 energy-converting hydrogenase B, subunit I.
 
 
 0.996
ADZ08522.1
PFAM: 4Fe-4S binding domain; KEGG: mth:MTH1241 polyferredoxin.
 
  
 0.996
ADZ10331.1
TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: mmh:Mmah_0726 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: Ferredoxin.
  
 
 0.993
ADZ08517.1
NADH dehydrogenase (quinone); KEGG: mth:MTH1246 hydrogenase subunit F; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase.
 
 
 0.987
ADZ08524.1
PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: mmg:MTBMA_c16270 energy-converting hydrogenase B, subunit M.
  
 
 0.987
ADZ08519.1
KEGG: mmg:MTBMA_c16320 energy-converting hydrogenase B, subunit H.
  
 
 0.984
ADZ08514.1
KEGG: mmg:MTBMA_c16360 energy-converting hydrogenase B, subunit D.
 
 
 
 0.970
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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