STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08528.1PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain; KEGG: shi:Shel_23820 choline dehydrogenase-like flavoprotein. (427 aa)    
Predicted Functional Partners:
ADZ08530.1
Long-chain-fatty-acid--CoA ligase; KEGG: shi:Shel_23800 AMP-forming long-chain acyl-CoA synthetase; PFAM: Male sterility, NAD-binding; AMP-dependent synthetase/ligase.
 
   
 0.824
ADZ08531.1
PFAM: Polysaccharide pyruvyl transferase; KEGG: shi:Shel_23790 hypothetical protein.
 
     0.811
ADZ08529.1
Hypothetical protein; Manually curated.
       0.781
ADZ08999.1
KEGG: mmg:MTBMA_c11120 tetratricopeptide repeat domain-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat.
   
 0.751
ADZ09090.1
Abortive infection protein; KEGG: mth:MTH633 hypothetical protein; PFAM: Abortive infection protein; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
   
 0.751
ADZ09580.1
KEGG: mmg:MTBMA_c09710 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
   
 0.751
ADZ09676.1
KEGG: mif:Metin_0662 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
   
 0.751
ADZ09696.1
PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: ter:Tery_3996 tetratricopeptide TPR_2.
   
 0.751
ADZ10056.1
Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat.
   
 0.751
ADZ10511.1
PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: mru:mru_0452 TPR repeat-containing protein.
   
 0.751
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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