Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADZ08548.1Putative signal transduction protein with CBS domains; KEGG: mmg:MTBMA_c16090 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core. (316 aa)    
Predicted Functional Partners:
ADZ08546.1
Putative signal transduction protein with CBS domains; KEGG: mth:MTH1226 inosine-5'-monophosphate dehydrogenase related protein V; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
 
   
0.972
ADZ08547.1
Putative signal transduction protein with CBS domains; KEGG: mmg:MTBMA_c16100 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
 
 
  
0.939
ADZ08550.1
CBS domain containing membrane protein; KEGG: mth:MTH1222 inosine-5'-monophosphate dehydrogenase related protein I; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
 
    
0.876
ADZ08549.1
Putative signal transduction protein with CBS domains; KEGG: mth:MTH1223 inosine-5'-monophosphate dehydrogenase related protein II; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
 
    
0.870
rpl13
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 
 0.861
rps9
KEGG: mth:MTH39 ribosomal protein S16; TIGRFAM: Ribosomal protein S9, archaeal; PFAM: Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.861
ADZ10423.1
Putative signal transduction protein with CBS domains; KEGG: mmg:MTBMA_c11350 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
 
    0.827
rpl30e
KEGG: mmg:MTBMA_c14400 50S ribosomal protein L30e; HAMAP: Ribosomal protein L30e; PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45; Belongs to the eukaryotic ribosomal protein eL30 family.
 
   0.789
ADZ08551.1
Y414 protein; KEGG: mfv:Mfer_0241 ATP dependent DNA ligase; TIGRFAM: Uncharacterised protein family MJ0414; PFAM: DNA ligase, ATP-dependent, central.
 
     0.782
rpl4
50S ribosomal protein L4P; Forms part of the polypeptide exit tunnel.
  
 
 0.776
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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