STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADZ08567.1Putative signal transduction protein with CBS domains; KEGG: mmg:MTBMA_c16670 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; ParB-like nuclease; SMART: ParB-like nuclease; Cystathionine beta-synthase, core. (264 aa)    
Predicted Functional Partners:
hisE
TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphohydrolase; KEGG: msi:Msm_1103 phosphoribosyl-ATP pyrophosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like.
     
 0.933
ADZ08338.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mmg:MTBMA_c00420 ATPase.
  
 
 0.892
ADZ09077.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: csc:Csac_2765 cobyrinic acid a,c-diamide synthase.
  
 
 0.892
ADZ10007.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mst:Msp_1571 ATPase.
  
 
 0.892
gatB
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
  
  
 0.825
ADZ08569.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: mma:MM_3156 oxidoreductase.
       0.636
ADZ08547.1
Putative signal transduction protein with CBS domains; KEGG: mmg:MTBMA_c16100 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
 
     0.622
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.620
ADZ08550.1
CBS domain containing membrane protein; KEGG: mth:MTH1222 inosine-5'-monophosphate dehydrogenase related protein I; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
 
     0.613
ADZ08565.1
KEGG: mfv:Mfer_1224 radical sam domain protein; PFAM: Radical SAM; Biotin/thiamin synthesis-associated protein; SMART: Elongator protein 3/MiaB/NifB.
  
    0.590
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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