STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08587.1PFAM: Abortive infection protein; KEGG: mth:MTH1189 hypothetical protein. (302 aa)    
Predicted Functional Partners:
ADZ08659.1
KEGG: mmg:MTBMA_c13710 hypothetical protein; TIGRFAM: Putative methanogenesis marker protein 1; YcaO-like; PFAM: YcaO-like.
  
  
 0.742
ADZ09461.1
KEGG: gmc:GY4MC1_3259 hypothetical protein.
  
     0.679
ADZ09697.1
PFAM: ABC-2 type transporter; KEGG: mpd:MCP_0255 ABC transporter permease protein.
  
  
 0.612
ADZ08303.1
PFAM: Protein of unknown function DUF1624; KEGG: mev:Metev_1686 hypothetical protein.
  
    0.596
trm1
N(2),N(2)-dimethylguanosine tRNA methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
       0.551
ADZ09021.1
PFAM: Nitroreductase-like; KEGG: mpl:Mpal_1679 nitroreductase.
 
  
 0.542
ADZ10061.1
PFAM: Nitroreductase-like; KEGG: dbr:Deba_2890 nitroreductase.
 
  
 0.531
ADZ08314.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c00690 ABC transporter, permease component.
  
  
 0.492
ADZ08704.1
KEGG: mmg:MTBMA_c14750 ABC transporter, permease component; TIGRFAM: Daunorubicin resistance ABC transporter membrane protein; PFAM: ABC-2 type transporter.
  
  
 0.492
ADZ08948.1
PFAM: ABC-2 type transporter; KEGG: msi:Msm_1484 multidrug ABC transporter, permease component.
  
  
 0.492
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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