Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ08589.1Protein of unknown function DUF77; KEGG: mmg:MTBMA_c15640 hypothetical protein; TIGRFAM: Protein of unknown function DUF77; PFAM: Protein of unknown function DUF77. (101 aa)    
Predicted Functional Partners:
ADZ08590.1
Protein of unknown function UPF0021; KEGG: msi:Msm_1028 ATPase; TIGRFAM: tRNA 2-thiolation protein; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase.
       0.669
ADZ10183.1
TIGRFAM: AMMECR1; HAMAP: AMMECR1-domain protein; KEGG: mru:mru_1728 AMMECR1 domain-containing protein; PFAM: AMMECR1.
  
    0.566
ADZ08567.1
Putative signal transduction protein with CBS domains; KEGG: mmg:MTBMA_c16670 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; ParB-like nuclease; SMART: ParB-like nuclease; Cystathionine beta-synthase, core.
 
    0.560
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family.
       0.541
ADZ10658.1
KEGG: msi:Msm_0963 endonuclease IV; PFAM: Xylose isomerase, TIM barrel domain; SMART: Endodeoxyribonuclease IV.
       0.537
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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