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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08597.1KEGG: mfv:Mfer_1237 hypothetical protein. (176 aa)    
Predicted Functional Partners:
ADZ08598.1
Methanogenesis marker protein 7; TIGRFAM: Uncharacterised conserved protein UCP019164, methanogenesis; KEGG: mmg:MTBMA_c15570 methyl coenzyme M reductase II, operon protein C.
       0.927
ADZ08599.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: mth:MTH1179 hypothetical protein.
       0.690
ADZ08594.1
KEGG: mru:mru_1950 TraB family protein; TIGRFAM: Pheromone shutdown, TraB; PFAM: Pheromone shutdown-related, TraB.
       0.596
ADZ08592.1
PFAM: Protein of unknown function DUF1922; KEGG: mth:MTH1184 hypothetical protein.
       0.538
comB
PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulpholactate phosphatase; HAMAP: 2-phosphosulpholactate phosphatase ComB; KEGG: mfv:Mfer_1236 2-phosphosulfolactate phosphatase.
       0.479
ADZ08596.1
PFAM: Deoxyribonuclease/rho motif-related TRAM; KEGG: mev:Metev_2175 deoxyribonuclease/rho motif-like TRAM protein.
       0.475
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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