STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08619.1KEGG: mth:MTH1149 ABC transporter subunit Ycf16; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (259 aa)    
Predicted Functional Partners:
ADZ08618.1
SufBD protein; PFAM: SUF system FeS cluster assembly, SufBD; KEGG: mmg:MTBMA_c15340 ABC-type transport system, permease component.
 
 0.999
ADZ08424.1
Cysteine desulfurase; KEGG: mmg:MTBMA_c17750 cystein desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
 
  
 0.997
ADZ09473.1
KEGG: msi:Msm_0263 nitrogen fixation protein, NifU; TIGRFAM: NIF system FeS cluster assembly, NifU-like; PFAM: NIF system FeS cluster assembly, NifU, N-terminal.
  
  
 0.990
ADZ09422.1
KEGG: mvn:Mevan_0177 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase.
  
  
 0.794
ADZ10659.1
KEGG: mmg:MTBMA_c10960 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.570
ADZ08401.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: mth:MTH1370 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
   
 0.568
ADZ10259.1
PFAM: Domain of unknown function DUF59; KEGG: mmg:MTBMA_c02430 hypothetical protein.
 
  
 0.519
ADZ08705.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: mth:MTH1093 ABC transporter (ATP-binding protein); PFAM: ABC transporter-like.
     
 0.505
ADZ10161.1
TIGRFAM: Methylthiotransferase; MiaB-like tRNA modifying enzyme, archaeal-type; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; KEGG: mth:MTH826 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB.
 
   
 0.470
ADZ10678.1
PFAM: Glutaredoxin; KEGG: mth:MTH1577 hypothetical protein.
 
  
 0.461
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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