STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08626.1Protein of unknown function DUF795; PFAM: Uncharacterised protein family UPF0348; KEGG: mmg:MTBMA_c15090 nucleotidyltransferase. (365 aa)    
Predicted Functional Partners:
ADZ08627.1
PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: mmg:MTBMA_c15080 peptidyl-prolyl cis-trans isomerase.
       0.917
ADZ08727.1
PFAM: PhoU; KEGG: mmg:MTBMA_c03000 phosphate transport system regulator.
 
     0.667
ADZ09011.1
TIGRFAM: Pyridoxal phosphate-dependent transferase, archaea; KEGG: msi:Msm_0767 selenocysteine synthase, SelA.
  
     0.639
ADZ08846.1
PFAM: tRNA-specific 2-thiouridylase; KEGG: mru:mru_1475 hypothetical protein.
  
     0.605
ADZ08786.1
PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: mmg:MTBMA_c02090 oligosaccharyl transferase STT3 subunit related protein.
  
     0.596
pyrC
Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
       0.593
ADZ08970.1
PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: mth:MTH1623 oligosaccharyl transferase STT3 subunit related protein.
  
     0.571
ADZ10736.1
PFAM: HTH transcriptional regulator, LysR; KEGG: mru:mru_0249 transcriptional regulator LysR family.
  
     0.558
ADZ09210.1
KEGG: mmg:MTBMA_c06320 hypothetical protein.
  
     0.537
ADZ10454.1
Protein of unknown function DUF129; PFAM: F420-0 gamma-glutamyl ligase-related; KEGG: mth:MTH1670 hypothetical protein.
  
     0.535
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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