STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08639.1PFAM: Phosphatidylglycerophosphatase A; KEGG: mfv:Mfer_0120 alpha-ribazole phosphatase cobz. (356 aa)    
Predicted Functional Partners:
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
  
  0.968
ADZ08637.1
tRNA ribose 2'-O-methyltransferase aTrm56; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.
       0.847
ADZ08640.1
PFAM: FAD dependent oxidoreductase; KEGG: mba:Mbar_A2687 hypothetical protein.
 
     0.666
ADZ08933.1
PFAM: Uncharacterised conserved protein UCP006598; KEGG: mmg:MTBMA_c04340 hypothetical protein.
  
     0.645
ADZ08935.1
UPF0288 protein; KEGG: mmg:MTBMA_c04360 peptidyl-prolyl cis-trans isomerase related protein; TIGRFAM: Uncharacterised protein family UPF0288, methanogenesis; HAMAP: Uncharacterised protein family UPF0288, methanogenesis; Belongs to the UPF0288 family.
 
     0.567
ADZ08694.1
Protein of unknown function DUF61; PFAM: Uncharacterised protein family UPF0216; KEGG: mth:MTH949 hypothetical protein; Belongs to the UPF0216 family.
 
     0.557
ADZ08940.1
Methanogenesis marker protein 17; KEGG: mth:MTH1870 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP019464, methanogenesis; PFAM: Uncharacterised conserved protein UCP019464, methanogenesis.
 
     0.546
ADZ08427.1
Methanogenesis marker protein 11; KEGG: msi:Msm_1295 DNA-binding protein; TIGRFAM: Putative methanogenesis marker protein 11; PFAM: Domain of unknown function DUF1743.
 
     0.520
ADZ10556.1
PFAM: Mur ligase, central; KEGG: mfv:Mfer_1205 mur ligase middle domain protein.
 
     0.519
ADZ09486.1
PFAM: Uncharacterised conserved protein UCP004962; KEGG: mpi:Mpet_0597 hypothetical protein.
  
     0.512
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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