STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08659.1KEGG: mmg:MTBMA_c13710 hypothetical protein; TIGRFAM: Putative methanogenesis marker protein 1; YcaO-like; PFAM: YcaO-like. (399 aa)    
Predicted Functional Partners:
ADZ10449.1
PFAM: TfuA-like, core; KEGG: mmg:MTBMA_c13720 hypothetical protein.
 
  
 0.910
ADZ08660.1
PFAM: Peptidase M50; KEGG: mth:MTH986 hypothetical protein.
 
     0.850
ADZ09697.1
PFAM: ABC-2 type transporter; KEGG: mpd:MCP_0255 ABC transporter permease protein.
  
  
 0.802
ADZ08587.1
PFAM: Abortive infection protein; KEGG: mth:MTH1189 hypothetical protein.
  
  
 0.742
ADZ09502.1
PFAM: Abortive infection protein; KEGG: ava:Ava_C0099 abortive infection protein.
  
  
 0.742
ADZ08605.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
   
 0.670
ADZ10061.1
PFAM: Nitroreductase-like; KEGG: dbr:Deba_2890 nitroreductase.
 
  
 0.666
ADZ10495.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
   
 0.662
ADZ08603.1
KEGG: mmg:MTBMA_c15500 methyl-coenzyme M reductase I, subunit epsilon; TIGRFAM: Methyl-coenzyme M reductase, protein C; PFAM: Methyl-coenzyme M reductase, protein C.
 
     0.657
ADZ08936.1
KEGG: mfv:Mfer_1092 methanogenesis marker protein 6; TIGRFAM: Uncharacterised conserved protein UCP005642, methanogenesis; PFAM: Uncharacterised conserved protein UCP005642, methanogenesis.
 
     0.651
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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