Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ08692.1PFAM: Domain of unknown function DUF22; KEGG: mth:MTH952 hypothetical protein. (126 aa)    
Predicted Functional Partners:
atpD
V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.977
atpB
V-type ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
    0.968
atpA
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
  
    0.960
atpC
V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.953
atpE
V-type proton ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.930
atpF
V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.775
ADZ08685.1
KEGG: mmg:MTBMA_c13450 A1AO ATPase, subunit K; HAMAP: ATPase, F0 complex, subunit C; PFAM: ATPase, F0/V0 complex, subunit C; Belongs to the V-ATPase proteolipid subunit family.
  
    0.758
ADZ08683.1
TIGRFAM: ATPase, A1A0, subunit H; KEGG: mth:MTH961 hypothetical protein.
     
 0.734
ADZ08684.1
V-type ATPase 116 kDa subunit; KEGG: mth:MTH960 V-type ATP synthase subunit I; manually curated; PFAM: ATPase, V0/A0 complex, 116kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
  
    0.722
ADZ08681.1
KEGG: mth:MTH963 fumarate hydratase, class I related protein; TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; PFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain.
       0.418
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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