STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08713.1PFAM: Type II secretion system F domain; KEGG: mmg:MTBMA_c02820 hypothetical protein. (371 aa)    
Predicted Functional Partners:
ADZ08712.1
PFAM: Type II secretion system protein E; KEGG: mmg:MTBMA_c02810 ATPase.
 
  
 0.984
ADZ08665.1
PFAM: Type II secretion system F domain; KEGG: mmg:MTBMA_c13650 hypothetical protein.
 
  
0.875
ADZ08408.1
PFAM: Protein of unknown function DUF192; KEGG: mth:MTH1377 hypothetical protein.
 
     0.709
ADZ10388.1
SMART: ATPase, AAA+ type, core; KEGG: mmg:MTBMA_c06590 ATPase.
 
     0.561
ADZ09081.1
SMART: ATPase, AAA+ type, core; KEGG: mmg:MTBMA_c09960 AAA+ class ATPase with chaperone activity.
 
     0.542
ADZ08711.1
Methyltransferase; KEGG: mma:MM_1239 methyltransferase.
       0.508
ADZ08907.1
Cell division ATPase MinD; KEGG: mmg:MTBMA_c04100 iron-sulfur cluster carrier protein; TIGRFAM: ATPase, cell division-type, MinD; PFAM: Cobyrinic acid a,c-diamide synthase.
 
  
 0.481
ADZ08908.1
KEGG: mth:MTH1840 cell division inhibitor; TIGRFAM: ATPase, cell division-type, MinD; PFAM: Cobyrinic acid a,c-diamide synthase.
 
  
 0.462
ADZ08326.1
KEGG: mth:MTH1706 cobalt transport protein CbiN.
  
     0.447
cdhA
Acetyl-CoA decarbonylase/synthase complex subunit alpha; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
       0.438
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.