STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08722.1KEGG: mmg:MTBMA_c02940 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat. (456 aa)    
Predicted Functional Partners:
eif5a
Translation initiation factor 5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
  
 0.854
ADZ08721.1
KEGG: mfv:Mfer_0521 methylated-DNA/protein-cysteinemethyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding.
       0.577
ADZ08361.1
tRNA (adenine-N(1)-)-methyltransferase; Manually curated; KEGG: mth:MTH1414 protein-L-isoaspartate methyltransferase-like protein; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase.
  
    0.515
ADZ10182.1
Small GTP-binding protein; KEGG: mmg:MTBMA_c12550 GTPase; TIGRFAM: Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related.
   
    0.499
rps8e
TIGRFAM: Ribosomal protein S8e; HAMAP: Ribosomal protein S8e, archaeal; KEGG: mth:MTH207 30S ribosomal protein S8e; PFAM: Ribosomal protein S8e/ribosomal biogenesis NSA2.
   
    0.499
ADZ08723.1
Digeranylgeranylglycerophospholipid reductase; Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3- diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di- O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains.
       0.495
ADZ08724.1
PFAM: 4Fe-4S binding domain; KEGG: mbn:Mboo_1946 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
       0.483
ADZ10196.1
TIGRFAM: Deoxyhypusine synthase; KEGG: mth:MTH127 deoxyhypusine synthase; PFAM: Deoxyhypusine synthase.
  
 
 0.481
guaAB
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.449
ADZ10056.1
Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat.
 
 0.437
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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