STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08753.1KEGG: mbn:Mboo_1858 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein. (475 aa)    
Predicted Functional Partners:
tbp
TATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
   
  
 0.719
gap
KEGG: mth:MTH1009 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II; HAMAP: Glyceraldehyde-3-phosphate dehydrogenase; SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain.
  
  
 0.598
gap-2
KEGG: mmg:MTBMA_c13910 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II; HAMAP: Glyceraldehyde-3-phosphate dehydrogenase; SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain.
  
  
 0.598
ADZ08704.1
KEGG: mmg:MTBMA_c14750 ABC transporter, permease component; TIGRFAM: Daunorubicin resistance ABC transporter membrane protein; PFAM: ABC-2 type transporter.
  
  
 0.563
ADZ08313.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: mth:MTH1487 ABC transporter (ATP-binding protein); PFAM: ABC transporter-like.
  
  
 0.562
ADZ08401.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: mth:MTH1370 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
  
  
 0.562
ADZ08705.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: mth:MTH1093 ABC transporter (ATP-binding protein); PFAM: ABC transporter-like.
  
  
 0.562
ADZ09306.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: mpd:MCP_1847 ABC transporter ATP binding protein; SMART: ATPase, AAA+ type, core.
  
  
 0.562
ADZ10275.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: mpd:MCP_0256 ABC transporter ATP binding protein; SMART: ATPase, AAA+ type, core.
  
  
 0.562
ADZ08947.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: msi:Msm_1483 multidrug ABC transporter, ATPase component; SMART: ATPase, AAA+ type, core.
  
  
 0.558
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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