STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08756.1TIGRFAM: Conserved hypothetical protein CHP01210; PFAM: Radical SAM; KEGG: mmg:MTBMA_c03260 Fe-S oxidoreductase; SMART: Elongator protein 3/MiaB/NifB. (355 aa)    
Predicted Functional Partners:
ADZ10258.1
PUA domain containing protein; KEGG: mst:Msp_1063 RNA-binding protein; PFAM: Pseudouridine synthase/archaeosine transglycosylase; SMART: Pseudouridine synthase/archaeosine transglycosylase.
 
     0.771
rpl40e
HAMAP: 50S ribosomal protein L40e; KEGG: mmg:MTBMA_c09420 50S ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
     0.684
ADZ09264.1
UPF0179 protein; KEGG: mmg:MTBMA_c09890 hypothetical protein; HAMAP: Uncharacterised protein family UPF0179; PFAM: Uncharacterised protein family UPF0179; Belongs to the UPF0179 family.
  
     0.661
ADZ08677.1
HAMAP: HTH transcriptional regulator, cro/C1-type DNA-binding domain-containing; PFAM: Helix-turn-helix type 3; KEGG: mmg:MTBMA_c13530 transcriptional regulator; SMART: Helix-turn-helix type 3.
  
     0.651
ADZ08779.1
NMD3 family protein; PFAM: NMD3; KEGG: mmg:MTBMA_c03450 NMD3-related protein.
  
     0.639
ADZ10542.1
ATPase associated with various cellular activities AAA_5; KEGG: mth:MTH892 ATP-dependent protease La related protein; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core.
  
     0.638
ADZ08755.1
PFAM: Protein of unknown function DUF1212; KEGG: mba:Mbar_A2684 hypothetical protein.
       0.628
ADZ09740.1
TIGRFAM: Peptidase S16, archaeal lon homologues; PFAM: Peptidase S16, Lon C-terminal; ATPase, AAA-5; KEGG: mth:MTH785 ATP-dependent protease Lon; SMART: ATPase, AAA+ type, core; Belongs to the peptidase S16 family.
  
     0.620
mptD
Protein of unknown function DUF372; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.619
ADZ10420.1
TIGRFAM: Peptidase S16, archaeal lon homologues; PFAM: Peptidase S16, Lon C-terminal; ATPase, AAA-5; KEGG: mth:MTH785 ATP-dependent protease Lon; SMART: ATPase, AAA+ type, core; Belongs to the peptidase S16 family.
  
     0.615
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.