STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08770.1PFAM: Major facilitator superfamily MFS-1; KEGG: mru:mru_0046 MFS transporter. (516 aa)    
Predicted Functional Partners:
ADZ08771.1
Metal dependent phosphohydrolase; TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mst:Msp_1165 hydrolase; SMART: Metal-dependent phosphohydrolase, HD domain.
       0.495
ADZ09303.1
PFAM: Major facilitator superfamily MFS-1; KEGG: bwe:BcerKBAB4_1929 major facilitator transporter.
  
     0.451
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.