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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08894.1PFAM: Peptidase C60, sortase A/B; KEGG: mth:MTH1829 hypothetical protein. (198 aa)    
Predicted Functional Partners:
ADZ08895.1
PFAM: Mechanosensitive ion channel MscS; KEGG: mmg:MTBMA_c04000 mechanosensitive ion channel.
       0.800
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.800
ADZ10637.1
Sortase family protein; KEGG: mth:MTH1030 hypothetical protein; TIGRFAM: Peptidase C60, sortase A/B; PFAM: Peptidase C60, sortase A/B.
  
     0.657
ADZ10027.1
APHP domain protein; PFAM: APHP; KEGG: mmg:MTBMA_c13780 hypothetical protein.
  
     0.646
ADZ08986.1
KEGG: mmg:MTBMA_c04730 hypothetical protein.
  
     0.634
ADZ09210.1
KEGG: mmg:MTBMA_c06320 hypothetical protein.
  
     0.525
ADZ08897.1
Nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
       0.523
ADZ08402.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c17580 ABC transporter, permease component.
  
     0.500
ADZ10741.1
KEGG: mmg:MTBMA_c01260 hypothetical protein.
  
     0.473
ADZ10274.1
KEGG: mmg:MTBMA_c02300 MurG-related protein.
  
     0.445
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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