STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08903.1Roadblock/LC7 family protein; KEGG: mmg:MTBMA_c04060 regulator protein; PFAM: Dynein light chain-related; SMART: Dynein light chain-related. (118 aa)    
Predicted Functional Partners:
ADZ09188.1
TIGRFAM: Small GTP-binding protein; PFAM: Mitochondrial Rho-like; KEGG: mth:MTH765 GTP-binding protein Rab related protein; SMART: Ras small GTPase, Ras type.
 
 
 0.978
ADZ09577.1
TIGRFAM: Small GTP-binding protein; PFAM: Mitochondrial Rho-like; KEGG: mth:MTH594 hypothetical protein; SMART: Ras small GTPase, Rab type.
 
 
 0.959
ADZ10536.1
PFAM: Nitrogen regulatory protein PII; KEGG: mmg:MTBMA_c11600 small GTPase.
 
 
 0.941
ADZ08902.1
3H domain-containing protein; PFAM: 3H domain; KEGG: mmg:MTBMA_c04050 2-phosphoglycerate kinase related protein with an additional conserved domain.
 
     0.718
ADZ08901.1
TIGRFAM: Zinc finger, ZPR1-type, subgroup; Zinc finger, ZPR1-type; KEGG: mmg:MTBMA_c04040 hypothetical protein.
 
     0.615
ADZ08907.1
Cell division ATPase MinD; KEGG: mmg:MTBMA_c04100 iron-sulfur cluster carrier protein; TIGRFAM: ATPase, cell division-type, MinD; PFAM: Cobyrinic acid a,c-diamide synthase.
 
    0.611
ADZ08908.1
KEGG: mth:MTH1840 cell division inhibitor; TIGRFAM: ATPase, cell division-type, MinD; PFAM: Cobyrinic acid a,c-diamide synthase.
 
    0.570
ADZ08904.1
PFAM: Protein of unknown function DUF1611; KEGG: mmg:MTBMA_c04070 hypothetical protein.
       0.566
ADZ08905.1
KEGG: mmg:MTBMA_c04080 hypothetical protein.
       0.566
ADZ08906.1
KEGG: mmg:MTBMA_c04090 hypothetical protein.
       0.438
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.