STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADZ08941.1Radical SAM domain protein; KEGG: mth:MTH1871 nitrogenase iron-molybdenum cofactor biosynthesis protein NifB; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB. (283 aa)    
Predicted Functional Partners:
ADZ08935.1
UPF0288 protein; KEGG: mmg:MTBMA_c04360 peptidyl-prolyl cis-trans isomerase related protein; TIGRFAM: Uncharacterised protein family UPF0288, methanogenesis; HAMAP: Uncharacterised protein family UPF0288, methanogenesis; Belongs to the UPF0288 family.
 
  
 0.944
ADZ10625.1
Nitrogenase; KEGG: mmp:MMP0859 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.943
ADZ08940.1
Methanogenesis marker protein 17; KEGG: mth:MTH1870 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP019464, methanogenesis; PFAM: Uncharacterised conserved protein UCP019464, methanogenesis.
 
     0.922
ADZ08939.1
Methanogenesis marker protein 15; KEGG: mth:MTH1869 activator of (R)-2-hydroxyglutaryl-CoA; TIGRFAM: Putative methanogenesis marker protein 15; CoA enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type.
 
    0.899
ADZ08938.1
Methanogenesis marker protein 5; KEGG: mth:MTH1868 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP018781, methanogenesis; PFAM: Uncharacterised conserved protein UCP018781, methanogenesis.
 
     0.897
ADZ10038.1
PFAM: Nitrogenase/oxidoreductase, component 1; KEGG: cts:Ctha_1833 Fe-only nitrogenase subunit beta; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.888
ADZ08936.1
KEGG: mfv:Mfer_1092 methanogenesis marker protein 6; TIGRFAM: Uncharacterised conserved protein UCP005642, methanogenesis; PFAM: Uncharacterised conserved protein UCP005642, methanogenesis.
       0.877
ADZ10627.1
Nitrogenase; KEGG: mvn:Mevan_0061 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.860
nifH-2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.809
ADZ10628.1
Nitrogenase alpha chain; KEGG: mmg:MTBMA_c01490 nitrogenase molybdenum-iron protein, alpha chain; TIGRFAM: Nitrogenase alpha chain; Nitrogenase component 1, alpha chain; PFAM: Nitrogenase/oxidoreductase, component 1.
 
  
 0.805
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.