Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08948.1PFAM: ABC-2 type transporter; KEGG: msi:Msm_1484 multidrug ABC transporter, permease component. (415 aa)    
Predicted Functional Partners:
ADZ08947.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: msi:Msm_1483 multidrug ABC transporter, ATPase component; SMART: ATPase, AAA+ type, core.
 
  
 0.918
ADZ10275.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: mpd:MCP_0256 ABC transporter ATP binding protein; SMART: ATPase, AAA+ type, core.
 
  
 0.819
ADZ09697.1
PFAM: ABC-2 type transporter; KEGG: mpd:MCP_0255 ABC transporter permease protein.
 
  
 0.796
ADZ08949.1
PFAM: Methyltransferase type 11; KEGG: mth:MTH1876 hypothetical protein.
       0.684
ADZ09554.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: msi:Msm_1483 multidrug ABC transporter, ATPase component; SMART: ATPase, AAA+ type, core.
 
  
 0.673
ADZ08313.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: mth:MTH1487 ABC transporter (ATP-binding protein); PFAM: ABC transporter-like.
 
  
 0.625
ADZ09710.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: rci:LRC320 ABC-type transport system, ATPase component; PFAM: ABC transporter-like.
 
  
 0.614
ADZ09306.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: mpd:MCP_1847 ABC transporter ATP binding protein; SMART: ATPase, AAA+ type, core.
 
  
 0.603
ADZ10097.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: rci:LRC320 ABC-type transport system, ATPase component; PFAM: ABC transporter-like.
 
  
 0.599
ADZ08659.1
KEGG: mmg:MTBMA_c13710 hypothetical protein; TIGRFAM: Putative methanogenesis marker protein 1; YcaO-like; PFAM: YcaO-like.
  
  
 0.532
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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