STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08953.1PFAM: Protein of unknown function DUF749; KEGG: msi:Msm_0794 hypothetical protein. (88 aa)    
Predicted Functional Partners:
ADZ08954.1
PFAM: Uncharacterised conserved protein UCP037052; KEGG: mth:MTH1881 hypothetical protein.
  
    0.972
ADZ08955.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: mth:MTH1882 hypothetical protein.
       0.814
ADZ10423.1
Putative signal transduction protein with CBS domains; KEGG: mmg:MTBMA_c11350 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
  
    0.616
ADZ08952.1
TIGRFAM: CoB--CoM heterodisulphide reductase, subunit B; KEGG: mmg:MTBMA_c04500 CoB-CoM heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain.
       0.534
ADZ08951.1
KEGG: mth:MTH1878 heterodisulfide reductase, subunit C; TIGRFAM: CoB--CoM heterodisulphide reductase, subunit C.
       0.515
ADZ08957.1
KEGG: mfv:Mfer_0246 signal transduction protein with cbs domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
  
    0.481
pgk2
KEGG: mmg:MTBMA_c04540 2-phosphoglycerate kinase.
       0.421
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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