STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08963.1PFAM: 4Fe-4S binding domain; KEGG: mbn:Mboo_1630 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein. (276 aa)    
Predicted Functional Partners:
ADZ08964.1
KEGG: mmg:MTBMA_c04630 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII.
       0.717
ADZ08965.1
PFAM: Amino acid permease domain; KEGG: mth:MTH546 cationic amino acid transporter related protein.
 
     0.588
ADZ10084.1
PFAM: 4Fe-4S binding domain; KEGG: mth:MTH221 hypothetical protein.
  
     0.520
ADZ08962.1
Putative transcriptional regulator, GntR family; KEGG: rci:RRC4 putative aminotransferase; PFAM: Aminotransferase, class I/classII.
       0.514
ADZ10099.1
KEGG: mhu:Mhun_0199 4Fe-4S ferredoxin, iron-sulfur binding.
  
     0.495
ADZ09422.1
KEGG: mvn:Mevan_0177 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase.
       0.442
ADZ09240.1
Transcriptional regulator, ArsR family; KEGG: mpd:MCP_0329 putative transcriptional regulator; PFAM: 4-vinyl reductase, 4VR; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
   
 0.422
ADZ09443.1
KEGG: mpd:MCP_0401 putative ABC transporter.
 
     0.420
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.