STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08987.1HAMAP: Uncharacterised protein family UPF0173, metal-dependent hydrolase; PFAM: Beta-lactamase-like; KEGG: mru:mru_0834 metallo-beta-lactamase superfamily protein; SMART: Beta-lactamase-like; Belongs to the UPF0173 family. (232 aa)    
Predicted Functional Partners:
ADZ08986.1
KEGG: mmg:MTBMA_c04730 hypothetical protein.
       0.881
asd-2
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of archaetidylethanolamine (PtdEtn) from archaetidylserine (PtdSer); Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily.
 
 
 
 0.742
ADZ08988.1
PFAM: GTP-binding protein, HSR1-related; KEGG: mmg:MTBMA_c04750 GTP-binding protein.
  
 
 0.730
ADZ08989.1
PFAM: Uncharacterised conserved protein UCP004977; KEGG: mmg:MTBMA_c04760 hypothetical protein.
       0.616
ADZ08990.1
PFAM: Protein of unknown function DUF2072, Zinc-ribbon; KEGG: mmg:MTBMA_c04770 hypothetical protein.
       0.613
ADZ09944.1
PFAM: Cation/H+ exchanger; KEGG: gfo:GFO_0816 sodium/hydrogen exchanger family protein.
  
    0.487
ADZ08985.1
Glycosyltransferase 28 domain protein; PFAM: Glycosyl transferase, family 28, C-terminal; KEGG: mst:Msp_0515 hypothetical protein.
     
 0.473
ADZ10225.1
KEGG: mba:Mbar_A3349 flavoredoxin Flr; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding.
 
  
 0.416
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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