Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADZ08989.1PFAM: Uncharacterised conserved protein UCP004977; KEGG: mmg:MTBMA_c04760 hypothetical protein. (127 aa)    
Predicted Functional Partners:
ADZ08988.1
PFAM: GTP-binding protein, HSR1-related; KEGG: mmg:MTBMA_c04750 GTP-binding protein.
 
   
 0.979
ADZ08990.1
PFAM: Protein of unknown function DUF2072, Zinc-ribbon; KEGG: mmg:MTBMA_c04770 hypothetical protein.
     
 0.909
ADZ08986.1
KEGG: mmg:MTBMA_c04730 hypothetical protein.
 
     0.677
ADZ10171.1
PFAM: Protein of unknown function DUF460; KEGG: mmg:MTBMA_c12360 hypothetical protein.
  
     0.654
ADZ08402.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c17580 ABC transporter, permease component.
 
     0.611
rnp3
Ribonuclease P protein component 3; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family.
  
     0.584
ADZ10340.1
Regulatory protein Crp; SMART: HTH transcriptional regulator, Crp; KEGG: mst:Msp_1188 transcriptional regulator.
  
     0.552
ADZ08987.1
HAMAP: Uncharacterised protein family UPF0173, metal-dependent hydrolase; PFAM: Beta-lactamase-like; KEGG: mru:mru_0834 metallo-beta-lactamase superfamily protein; SMART: Beta-lactamase-like; Belongs to the UPF0173 family.
       0.538
ADZ10735.1
TIGRFAM: 6-phospho 3-hexuloisomerase; KEGG: mfv:Mfer_1158 3-hexulose-6-phosphate isomerase; PFAM: Sugar isomerase (SIS).
       0.538
ADZ09608.1
Protein of unknown function UPF0058; PFAM: Uncharacterised protein family UPF0058; KEGG: mmg:MTBMA_c06730 hypothetical protein.
  
   
 0.532
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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