STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09078.1PFAM: Flavodoxin/nitric oxide synthase; KEGG: rci:RCIX1909 putative protoporphyrinogen oxidase. (176 aa)    
Predicted Functional Partners:
ADZ10487.1
Magnesium chelatase; PFAM: von Willebrand factor, type A; ATPase, AAA-5; KEGG: mmg:MTBMA_c09440 cobaltochelatase subunit-like protein; SMART: von Willebrand factor, type A; ATPase, AAA+ type, core.
     
  0.900
ADZ09080.1
KEGG: mpd:MCP_2892 hypothetical protein.
 
     0.889
ADZ09079.1
Regulatory protein MarR; KEGG: mmg:MTBMA_c13170 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
 
     0.793
ADZ09272.1
Methyltransferase MtaA/CmuA family; KEGG: msi:Msm_0518 methylcobalamin:coenzyme M methyltransferase, MtaA; TIGRFAM: Methyltransferase MtaA/CmuA; PFAM: Uroporphyrinogen decarboxylase (URO-D).
 
   
 0.438
ADZ10594.1
PHP domain protein; KEGG: mba:Mbar_A1414 hypothetical protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal.
 
     0.416
ADZ09077.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: csc:Csac_2765 cobyrinic acid a,c-diamide synthase.
       0.401
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.