STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09081.1SMART: ATPase, AAA+ type, core; KEGG: mmg:MTBMA_c09960 AAA+ class ATPase with chaperone activity. (449 aa)    
Predicted Functional Partners:
ADZ08712.1
PFAM: Type II secretion system protein E; KEGG: mmg:MTBMA_c02810 ATPase.
 
     0.571
ADZ08713.1
PFAM: Type II secretion system F domain; KEGG: mmg:MTBMA_c02820 hypothetical protein.
 
     0.542
ADZ08904.1
PFAM: Protein of unknown function DUF1611; KEGG: mmg:MTBMA_c04070 hypothetical protein.
  
     0.513
ADZ08665.1
PFAM: Type II secretion system F domain; KEGG: mmg:MTBMA_c13650 hypothetical protein.
 
     0.499
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.472
ADZ10027.1
APHP domain protein; PFAM: APHP; KEGG: mmg:MTBMA_c13780 hypothetical protein.
  
     0.401
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.