STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09098.1Conserved repeat domain protein; TIGRFAM: Domain of unknown function DUF11; PFAM: Bacterial Ig-like, group 1; Domain of unknown function DUF11; KEGG: fjo:Fjoh_3971 hypothetical protein; SMART: Bacterial Ig-like, group 1. (1295 aa)    
Predicted Functional Partners:
ADZ10709.1
TIGRFAM: Parallel beta-helix repeat-2; Domain of unknown function DUF11; KEGG: mru:mru_0255 adhesin-like protein.
  
     0.593
ADZ09913.1
TIGRFAM: Parallel beta-helix repeat-2; Domain of unknown function DUF11; KEGG: msi:Msm_0282 adhesin-like protein.
  
     0.539
ADZ09175.1
KEGG: mmg:MTBMA_c12420 transglutaminase related protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like.
  
     0.510
ADZ09099.1
KEGG: rmr:Rmar_0972 hypothetical protein.
       0.445
ADZ09100.1
KEGG: amr:AM1_1920 hypothetical protein.
       0.445
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.