STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09132.1PFAM: Glycosyl transferase, family 2; KEGG: mfv:Mfer_1074 glycosyl transferase family 2. (242 aa)    
Predicted Functional Partners:
ADZ09133.1
PFAM: UbiA prenyltransferase; KEGG: pto:PTO0182 (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase.
       0.675
ADZ09134.1
PFAM: Protein of unknown function DUF422; KEGG: aca:ACP_2245 hypothetical protein.
       0.675
ADZ09135.1
PFAM: Protein of unknown function DUF422; KEGG: rci:LRC395 hypothetical protein.
       0.582
ADZ10048.1
PFAM: Peptidase C60, sortase A/B; KEGG: mmg:MTBMA_c03990 sortase related protein.
 
     0.476
ADZ09131.1
TIGRFAM: Parallel beta-helix repeat-2; KEGG: msi:Msm_1116 adhesin-like protein.
       0.429
ADZ08894.1
PFAM: Peptidase C60, sortase A/B; KEGG: mth:MTH1829 hypothetical protein.
 
     0.427
ADZ08986.1
KEGG: mmg:MTBMA_c04730 hypothetical protein.
  
     0.410
ADZ10027.1
APHP domain protein; PFAM: APHP; KEGG: mmg:MTBMA_c13780 hypothetical protein.
  
     0.409
ADZ09136.1
PFAM: Polysaccharide biosynthesis protein; KEGG: pho:PH0421 lipopolysaccharide O-side chain biosynthesis protein (O-antigen transporter).
       0.400
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.