STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09141.1PFAM: Glycosyl transferase, family 2; KEGG: pab:PAB0795 rhamnosyl transferase related protein. (355 aa)    
Predicted Functional Partners:
ADZ09166.1
KEGG: mst:Msp_0500 glycosyltransferase.
 
     0.577
ADZ09146.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: msi:Msm_1331 sugar transferase, WcaJ; PFAM: Bacterial sugar transferase.
 
  
 0.537
ADZ09151.1
PFAM: ABC-2 type transporter; KEGG: mst:Msp_0204 polysaccharide/polyol phosphate ABC transporter permease.
  
  
 0.530
ADZ09154.1
PFAM: Glycosyl transferase, family 2; KEGG: mst:Msp_0493 glycosyltransferase.
 
  
 0.474
ADZ09169.1
TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: mfv:Mfer_0285 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase.
 
  
 0.459
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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