Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADZ09142.1PFAM: Domain of unknown function DUF1972; Glycosyl transferase, group 1; KEGG: llc:LACR_0206 glycosyltransferase. (412 aa)    
Predicted Functional Partners:
ADZ09304.1
KEGG: mpl:Mpal_1491 hypothetical protein.
   
 
 0.567
ADZ09153.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.566
ADZ09136.1
PFAM: Polysaccharide biosynthesis protein; KEGG: pho:PH0421 lipopolysaccharide O-side chain biosynthesis protein (O-antigen transporter).
 
  
 0.558
ADZ09222.1
PFAM: Polysaccharide biosynthesis protein; KEGG: mae:Maeo_0391 polysaccharide biosynthesis protein.
 
  
 0.553
ADZ09143.1
KEGG: mru:mru_1246 adhesin-like protein; TIGRFAM: Domain of unknown function DUF11; PFAM: Polysaccharide deacetylase.
       0.545
ADZ09539.1
PFAM: Polysaccharide biosynthesis protein; KEGG: mst:Msp_0063 polysaccharide biosynthesis protein.
 
  
 0.515
ADZ09114.1
PFAM: Polysaccharide biosynthesis protein; KEGG: mth:MTH342 succinoglycan biosynthesis transport protein.
 
  
 0.509
ADZ08974.1
PFAM: Polysaccharide biosynthesis protein; KEGG: mru:mru_1880 polysaccharide biosynthesis protein.
 
  
 0.485
ADZ10304.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: mst:Msp_1114 dTDP-D-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
  
  
 0.479
ADZ10107.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: mfv:Mfer_1284 metallophosphoesterase.
   
 
 0.477
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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