Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADZ09146.1TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: msi:Msm_1331 sugar transferase, WcaJ; PFAM: Bacterial sugar transferase. (463 aa)    
Predicted Functional Partners:
ADZ08588.1
Glutamine--scyllo-inositol transaminase; KEGG: mmg:MTBMA_c15650 pyridoxal phosphate-dependent enzyme; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.875
ADZ09147.1
PFAM: Glycosyl transferase, family 2; KEGG: mru:mru_0112 glycosyl transferase GT2 family.
  
 0.862
ADZ09148.1
PFAM: Glycosyl transferase, family 2; KEGG: msi:Msm_1329 glycosyl transferase.
 
  
 0.804
ADZ08973.1
PFAM: Methyltransferase type 11; KEGG: npu:Npun_F4534 methyltransferase type 11.
 
  
 0.762
ADZ09730.1
ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.759
ADZ09089.1
GDP-mannose 4,6-dehydratase; KEGG: mst:Msp_0990 GDP-D-mannose dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
 
  
 0.749
ADZ09536.1
GDP-mannose 4,6-dehydratase; KEGG: mst:Msp_0990 GDP-D-mannose dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
 
  
 0.745
ADZ09169.1
TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: mfv:Mfer_0285 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase.
 
  
 0.689
ADZ09114.1
PFAM: Polysaccharide biosynthesis protein; KEGG: mth:MTH342 succinoglycan biosynthesis transport protein.
 
  
 0.669
ADZ08274.1
KEGG: mth:MTH352 hypothetical protein; PFAM: Cupin 2, conserved barrel; SMART: Cupin 1.
  
  
 0.655
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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