STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09159.1Hypothetical protein; KEGG: mst:Msp_0215 glycosyltransferase. (640 aa)    
Predicted Functional Partners:
ADZ09161.1
TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: mth:MTH836 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.586
ADZ09158.1
PFAM: Two component regulator three Y; KEGG: bcz:BCZK4968 hypothetical protein.
       0.568
ADZ10170.1
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mth:MTH837 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.519
ADZ09160.1
PFAM: Glycosyl transferase, family 2; KEGG: mru:mru_1072 glycosyl transferase GT2 family.
 
     0.454
ADZ09116.1
TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: mpl:Mpal_0929 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.427
ADZ09151.1
PFAM: ABC-2 type transporter; KEGG: mst:Msp_0204 polysaccharide/polyol phosphate ABC transporter permease.
 
  
 0.422
ADZ09157.1
Hypothetical protein; KEGG: mst:Msp_0215 glycosyltransferase.
 
    
0.420
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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