Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ09169.1TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: mfv:Mfer_0285 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase. (280 aa)    
Predicted Functional Partners:
ADZ09153.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.999
ADZ10304.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: mst:Msp_1114 dTDP-D-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
 
 
 0.992
ADZ09825.1
KEGG: pmx:PERMA_1747 UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1); PFAM: NAD-dependent epimerase/dehydratase.
  
 0.919
ADZ09168.1
TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: mth:MTH1791 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase.
 
  
 0.911
ADZ09422.1
KEGG: mvn:Mevan_0177 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase.
     
 0.821
ADZ08973.1
PFAM: Methyltransferase type 11; KEGG: npu:Npun_F4534 methyltransferase type 11.
 
  
 0.809
ADZ08291.1
PFAM: Nucleotidyl transferase; KEGG: mmg:MTBMA_c01060 nucleotidyl transferase.
  
  
 0.805
ADZ09146.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: msi:Msm_1331 sugar transferase, WcaJ; PFAM: Bacterial sugar transferase.
 
  
 0.689
ADZ09115.1
KEGG: mba:Mbar_A0021 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase.
 
 
 0.661
ADZ08975.1
KEGG: pmx:PERMA_1747 UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1); PFAM: NAD-dependent epimerase/dehydratase.
  
 
 0.611
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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