STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09178.1Peptidase C1A papain; KEGG: mac:MA1513 hypothetical protein; PFAM: Peptidase C1A, papain C-terminal; SMART: Peptidase C1A, papain C-terminal. (645 aa)    
Predicted Functional Partners:
ADZ08845.1
YbhB YbcL family protein; KEGG: sat:SYN_03131 phosphatidylethanolamine-binding protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP.
   
 
 0.794
ADZ08374.1
PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: rci:RCIX757 peptidyl-prolyl cis-trans isomerase B (cyclophilin type).
   
 
 0.786
ADZ08787.1
Small GTP-binding protein; KEGG: mth:MTH1621 GTP1/OBG family GTP-binding protein; TIGRFAM: Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; TGS.
  
 
   0.761
rps11
Ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
   
 0.747
ADZ08682.1
PFAM: Citrate synthase-like; KEGG: mmg:MTBMA_c13480 citrate synthase.
   
 
 0.740
ADZ08728.1
PFAM: Citrate synthase-like; KEGG: mmg:MTBMA_c03010 citrate synthase-related protein; Belongs to the citrate synthase family.
   
 
 0.740
ADZ10283.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, AAA-type, CDC48; KEGG: mth:MTH1639 cell division control protein Cdc48; PFAM: ATPase, AAA-type, core; ATPase, AAA-type, VAT, N-terminal; Cell division protein 48, CDC48, domain 2.
   
 0.642
ADZ09848.1
Chloride peroxidase; KEGG: mpl:Mpal_2171 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1.
  
  
 0.579
ADZ08988.1
PFAM: GTP-binding protein, HSR1-related; KEGG: mmg:MTBMA_c04750 GTP-binding protein.
   
 0.566
ADZ08748.1
PFAM: Thioredoxin domain; KEGG: mth:MTH1745 protein disulphide isomerase.
   
 0.486
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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