STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09179.1Polymorphic outer membrane protein; KEGG: mmg:MTBMA_c06050 pseudomurein-binding protein; TIGRFAM: Polymorphic membrane protein, Chlamydia; PFAM: ORF3b coronavirus protein; Polymorphic membrane protein, Chlamydia. (592 aa)    
Predicted Functional Partners:
ADZ09023.1
Hypothetical protein; KEGG: dae:Dtox_3122 tetratricopeptide TPR_2 repeat protein.
  
     0.538
ADZ10107.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: mfv:Mfer_1284 metallophosphoesterase.
  
     0.521
ADZ09842.1
Conserved repeat domain protein; TIGRFAM: Domain of unknown function DUF11; Parallel beta-helix repeat-2; PFAM: Domain of unknown function DUF11; Polymorphic membrane protein, Chlamydia; KEGG: abi:Aboo_0648 fibronectin type III domain protein; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat.
  
     0.452
ADZ09458.1
KEGG: tva:TVAG_021770 hypothetical protein.
  
     0.435
ADZ09180.1
Hypothetical protein.
       0.427
ADZ09178.1
Peptidase C1A papain; KEGG: mac:MA1513 hypothetical protein; PFAM: Peptidase C1A, papain C-terminal; SMART: Peptidase C1A, papain C-terminal.
       0.423
ADZ10274.1
KEGG: mmg:MTBMA_c02300 MurG-related protein.
  
     0.417
ADZ10278.1
KEGG: mfv:Mfer_0066 cell wall biosynthesis protein.
  
     0.413
ADZ08419.1
Replication factor-A domain protein; PFAM: Replication factor A, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mmg:MTBMA_c17710 replication factor A.
  
     0.403
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.