STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09182.1Desulfoferrodoxin; KEGG: mmg:MTBMA_c11510 superoxide reductase; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding domain; PFAM: Desulfoferrodoxin, ferrous iron-binding domain; Desulfoferrodoxin Dfx. (125 aa)    
Predicted Functional Partners:
ADZ09181.1
PFAM: Rubrerythrin; KEGG: mmg:MTBMA_c11500 rubrerythrin.
 
  
 0.933
ADZ09248.1
Ferroxidase; KEGG: mmg:MTBMA_c06090 ferritin; PFAM: Ferritin/Dps protein.
 
  
 0.910
ADZ09879.1
PFAM: Conserved hypothetical protein, MTH865; KEGG: mae:Maeo_0093 MTH865-like family protein.
  
    0.866
ADZ08809.1
KEGG: tpd:Teth39_0972 beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like.
  
 0.768
ADZ08959.1
KEGG: mfv:Mfer_0426 flavodoxin/nitric oxide synthase; PFAM: Flavodoxin/nitric oxide synthase; Beta-lactamase-like; SMART: Beta-lactamase-like.
  
 0.708
ADZ08390.1
KEGG: mfv:Mfer_0426 flavodoxin/nitric oxide synthase; PFAM: Flavodoxin/nitric oxide synthase; Beta-lactamase-like; SMART: Beta-lactamase-like.
  
 0.702
ADZ09336.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mth:MTH1352 rubredoxin; Belongs to the rubredoxin family.
 
  
 0.656
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.651
hcp-2
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.651
ADZ09246.1
Rubredoxin-type Fe(Cys)4 protein; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
  
  
 0.638
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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