STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09193.1KEGG: mmg:MTBMA_c08860 hypothetical protein. (87 aa)    
Predicted Functional Partners:
ADZ09271.1
KEGG: msi:Msm_0519 hypothetical protein.
  
     0.580
ADZ09599.1
KEGG: mmg:MTBMA_c09620 hypothetical protein.
  
     0.572
ADZ10736.1
PFAM: HTH transcriptional regulator, LysR; KEGG: mru:mru_0249 transcriptional regulator LysR family.
 
     0.527
ADZ09194.1
KEGG: gsu:GSU3016 hypothetical protein.
 
     0.520
ADZ09421.1
KEGG: mru:mru_1572 hypothetical protein.
  
     0.436
ADZ09515.1
KEGG: msi:Msm_0309 hypothetical protein.
  
     0.436
ADZ09788.1
PFAM: DNA helicase, UvrD/REP type; KEGG: mru:mru_1111 ATP-dependent DNA helicase UvrD/REP family.
  
     0.424
ADZ10163.1
KEGG: mst:Msp_0375 hypothetical protein.
  
     0.419
ADZ09023.1
Hypothetical protein; KEGG: dae:Dtox_3122 tetratricopeptide TPR_2 repeat protein.
  
     0.409
ADZ08940.1
Methanogenesis marker protein 17; KEGG: mth:MTH1870 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP019464, methanogenesis; PFAM: Uncharacterised conserved protein UCP019464, methanogenesis.
  
     0.408
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.