STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09200.1Na+/Ca+ antiporter, CaCA family; KEGG: mth:MTH1155 Na+/Ca+ exchanging protein related; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region. (339 aa)    
Predicted Functional Partners:
ADZ08915.1
TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: mmg:MTBMA_c04210 thiol:fumarate reductase, subunit B; PFAM: Cysteine-rich domain; Ferredoxin.
       0.828
ADZ08273.1
Arsenite-activated ATPase ArsA; KEGG: mth:MTH1511 arsenical pump-driving ATPase; TIGRFAM: ATPase, anion-transporting.
  
   0.708
secD
Preprotein translocase, SecD/SecF/SecDF; Involved in protein export.
     
 0.543
secF
Preprotein translocase, SecD/SecF/SecDF; Involved in protein export.
       0.537
ADZ09823.1
PFAM: Cation/H+ exchanger; KEGG: mba:Mbar_A3070 Na(+)/H(+) antiporter.
 
 
 
 0.522
ADZ09663.1
PFAM: Cation/H+ exchanger; KEGG: mth:MTH760 Na+/H+-exchanging protein:Na+/H+ antiporter.
 
 
 
 0.517
pyrI
Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase.
       0.495
pcm
Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
 
    0.469
ADZ09203.1
Flavodoxin; KEGG: mmg:MTBMA_c12440 flavodoxin.
       0.456
ADZ09198.1
KEGG: apo:Arcpr_0384 protein of unknown function UPF0047; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047.
       0.403
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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