STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09228.1PFAM: Peptidase M48; KEGG: mmg:MTBMA_c03880 peptidase related protein. (473 aa)    
Predicted Functional Partners:
ADZ08417.1
PFAM: Auxin efflux carrier; KEGG: mth:MTH1382 hypothetical protein.
 
  
 0.706
ADZ08533.1
PFAM: Amino acid-binding ACT; KEGG: mmg:MTBMA_c16230 energy-converting hydrogenase B, subunit Q.
  
    0.597
ADZ10341.1
GHMP kinase; KEGG: mst:Msp_1187 kinase; manually curated; PFAM: GHMP kinase.
  
    0.580
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.571
ADZ10105.1
KEGG: mfv:Mfer_0531 atpase associated with various cellular activities aaa_5; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core.
  
  
 0.530
rpl4
50S ribosomal protein L4P; Forms part of the polypeptide exit tunnel.
  
 
 0.488
ADZ09227.1
PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: pth:PTH_0218 hypothetical protein.
       0.467
ADZ08843.1
Manually curated; PFAM: ABC transporter-like; RNase L inhibitor RLI, possible metal-binding domain; 4Fe-4S binding domain; KEGG: mth:MTH1695 putative ATPase RIL; SMART: ATPase, AAA+ type, core.
  
    0.465
ADZ10270.1
KEGG: mst:Msp_1077 dihydrolipoamide dehydrogenase-related protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 0.447
ilvD
PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: mmg:MTBMA_c00370 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.445
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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